Proteome

Sequence Analysis

Training Modules

• Analysis of low complexity sequences by Oralee Branch (NCBI, USA). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Fundamentals in Bioinformatics Oriented Statistics by Claudio Struchiner (FIOCRUZ, Brazil) and others. Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Clustering Analysis: Overview, Methods and Problems by Winston Hide (SANBI, South Africa). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Database Development/SQL/MySQL by Chuong Huynh (NCBI, USA). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Fundamentals in Sequence Analysis by Hugues Sicotte (NCBI, USA). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Identifying functional motifs and structural domains by comparing sequences against PROSITE, BLOCKS, SMART, Pfam, CDD databases, Prodom, Trembl, Interpro by Nicola Mulder (EBI, UK). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• [295Kb Microsoft Powerpoint] "Large Scale Sequencing Projects: Approaches and Pitfalls", by Daniel Lawson (Sanger Centre, UK). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Mapping of GO objects to sequence of interest by Nicola Mulder (EBI, UK). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Phred, Phrap Analysis by Arthur Gruber (University of São Paulo, Brazil). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Protein Sequences Analysis I by Hugues Sicotte (NCBI, USA). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Protein Sequence Analysis II by Nicola Mulder (EBI, UK). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Transcriptome Analysis Workshop by John Quackenbush (TIGR, USA). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• Use of bioinformatics in drug development and diagnostics by Ashok Kolaskar (University of Pune, India). Module of the "International Training Course on Bioinformatics (Computational Biology) Applied to Genomic Studies", held in IOC/FIOCRUZ, Rio de Janeiro, Brazil, May 21-June 15, 2001
  
  
• AAnP - IUPAC-IUBMB nomenclature for amino acids and peptides
• BioActivity - Protein sequence and structure analysis: a practical guide
• Biocomputing courses resource list - Syllabi and tutorials on Bioinformatics (VSNS BCD)
• BioComputing Hypertext Coursebook - (VSNS BCD)
• Biocomputing tutorials - EMBnet Biocomputing tutorials
• BioInformatics guide for sequence analysis (Martin Aslett)
• BioInformatique, par SIS (Inst. Pasteur, Paris)
• BIOSCI/Bionet communications forum
• Carbohydrates - IUPAC-IUBMB nomenclature for carbohydrates
• Genetic codes - List of non-standard genetic codes from NCBI
• Homology modeling course (EMBL)
• Pedestrian guide to analysing sequence databases (Rost and Schneider, EMBL)
• Sequence similarity searches primer (Keith Robison, Harvard)
• Tutorials - Ontario Centre for Genomic Computing

last modification: 16/October/2002
Web Designer: Leonardo Leite
lsleite@procc.fiocruz.br