Phred/Phrap Analysis

  • Consed
[Archive .txt] - Current documentation for consed program
  • General
[7Kb Microsoft Word] - General documentation for Swat, Crossmatch, Phrap
  • Phrap
[87Kb Microsoft Word] - Current documentation for Phrap
  • Phred
[44Kb Microsoft Word] - Current documentation for Phred
  • Swat
[14 Kb Microsoft Word] - documentation for swat
  • PhredPhrap
[4765Kb Microsoft Powerpoint]
  • Consed
[211Kb Adobe Acrobat] - Original Genome Rsearch paper from Phil Green regarding Consed
  • PhredI
[9Kb Adobe Acrobat] - Genome Research paper on Phred
  • PhredII
[235Kb Adobe Acrobat] - Genome Research paper on Phred

Consed is a assembly viewer and editor program.

Swat is a ...

phred is a base calling/confidence evaluator software

Phrap is a the sequence assembler.